@> 566 atoms and 1 coordinate set(s) were parsed in 0.06s.
@> 1472 atoms and 10 coordinate set(s) were parsed in 0.51s.

Visualizations and results¶

Original Structure Visualization¶

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@> 566 atoms and 1 coordinate set(s) were parsed in 0.06s.
@> 1472 atoms and 10 coordinate set(s) were parsed in 0.51s.
2kxoA_TEMP
Blue:3r9jC
Red:2kxoA

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AlphaFold predictions¶

Best AF prediction to fold 1¶

@> 566 atoms and 1 coordinate set(s) were parsed in 0.07s.
@> 566 atoms and 1 coordinate set(s) were parsed in 0.06s.
Blue:ShallowMsa_053_unrelaxed_rank_001_alphafold2_ptm_model_2_seed_000
Red:3r9jC

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Best AF prediction to fold 2¶

@> 566 atoms and 1 coordinate set(s) were parsed in 0.06s.
@> 1472 atoms and 10 coordinate set(s) were parsed in 0.54s.
@> 566 atoms and 1 coordinate set(s) were parsed in 0.06s.
@> 1472 atoms and 10 coordinate set(s) were parsed in 0.51s.
2kxoA_TEMP
Blue:ShallowMsa_032_unrelaxed_rank_002_alphafold2_ptm_model_5_seed_000
Red:2kxoA

3Dmol.js failed to load for some reason. Please check your browser console for error messages.

EsmFold Prediction¶

Best EsmFold prediction to fold 1¶

@> 566 atoms and 1 coordinate set(s) were parsed in 0.07s.
@> 545 atoms and 1 coordinate set(s) were parsed in 0.07s.
@> 566 atoms and 1 coordinate set(s) were parsed in 0.06s.
@> 545 atoms and 1 coordinate set(s) were parsed in 0.07s.
reference and target coordinate arrays must have same number of atoms
ShallowMsa_064_2_TEMP
Blue:3r9jC
Red:ShallowMsa_064_2

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Best EsmFold prediction to fold 2¶

@> 1472 atoms and 10 coordinate set(s) were parsed in 0.55s.
@> 524 atoms and 1 coordinate set(s) were parsed in 0.06s.
reference and target coordinate arrays must have same number of atoms
@> 1472 atoms and 10 coordinate set(s) were parsed in 0.57s.
@> 524 atoms and 1 coordinate set(s) were parsed in 0.06s.
ShallowMsa_048_4_TEMP
Blue:2kxoA
Red:ShallowMsa_048_4

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Contact maps Msa Transformers¶

No max_f1Score_pdb2
No max_precision_pdb2
No max_recall_pdb2
No max_f1Score_pdb2
No cmap_pred_precision_2
No cmap_pred_recall_2
No plot for f1Score_1
No plot for f1Score_2
No description has been provided for this image
No precision_2
No description has been provided for this image
No recall_2
No description has been provided for this image